Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.84□□□□□ -0.03
SSU72Q9NP77 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSU72Q9NP77 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSU72Q9NP77 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSU72Q9NP77 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSU72Q9NP77 AC111170.3-201ENST00000624282 2464 ntBASIC14.84□□□□□ -0.03
SSU72Q9NP77 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.84□□□□□ -0.03
SSU72Q9NP77 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSU72Q9NP77 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSU72Q9NP77 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSU72Q9NP77 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
SSU72Q9NP77 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSU72Q9NP77 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSU72Q9NP77 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
SSU72Q9NP77 SALL4P5-201ENST00000419001 1760 ntBASIC14.83□□□□□ -0.03
SSU72Q9NP77 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 AL139094.1-201ENST00000405549 1188 ntBASIC14.83□□□□□ -0.04
SSU72Q9NP77 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 AC107373.2-201ENST00000607735 490 ntBASIC14.83□□□□□ -0.04
SSU72Q9NP77 AL138828.2-201ENST00000615812 383 ntBASIC14.83□□□□□ -0.04
SSU72Q9NP77 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 AC068760.1-201ENST00000493579 1953 ntBASIC14.83□□□□□ -0.04
SSU72Q9NP77 MRPL37P1-201ENST00000592451 1337 ntBASIC14.83□□□□□ -0.04
SSU72Q9NP77 AL136172.1-201ENST00000598590 1394 ntBASIC14.83□□□□□ -0.04
SSU72Q9NP77 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSU72Q9NP77 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.83□□□□□ -0.04
SSU72Q9NP77 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AC003102.2-201ENST00000589195 1469 ntBASIC14.82□□□□□ -0.04
SSU72Q9NP77 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AL139400.1-201ENST00000366220 510 ntBASIC14.82□□□□□ -0.04
SSU72Q9NP77 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSU72Q9NP77 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSU72Q9NP77 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms