Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHACTR1Q9C0D0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.23■□□□□ 0.03
PHACTR1Q9C0D0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 TSSK5P-201ENST00000423978 907 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AC022616.1-201ENST00000518688 554 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 SRD5A3P1-201ENST00000603021 949 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 BX539320.1-201ENST00000623759 877 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 AC015818.8-201ENST00000587907 1519 ntBASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHACTR1Q9C0D0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 RN7SL832P-201ENST00000607781 1756 ntBASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AC097376.2-205ENST00000610159 5334 ntBASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AL023775.1-201ENST00000454907 1746 ntBASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AC097493.3-201ENST00000509725 367 ntBASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 RRP7BP-205ENST00000566851 833 ntBASIC15.21■□□□□ 0.03
PHACTR1Q9C0D0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms