Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC22CQ9BRL7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ATP5G2P1-201ENST00000433580 426 ntBASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 AC010507.1-201ENST00000633895 436 ntBASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC22CQ9BRL7 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms