Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EBF4Q9BQW3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EBF4Q9BQW3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.62□□□□□ -0.07
EBF4Q9BQW3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.62□□□□□ -0.07
EBF4Q9BQW3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
EBF4Q9BQW3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AC010336.2-201ENST00000564226 506 ntBASIC14.61□□□□□ -0.07
EBF4Q9BQW3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 NUTM2HP-201ENST00000442076 2498 ntBASIC14.61□□□□□ -0.07
EBF4Q9BQW3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 AC093525.8-201ENST00000624099 1342 ntBASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
EBF4Q9BQW3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AC051619.7-201ENST00000568314 623 ntBASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AC009093.7-201ENST00000623853 1223 ntBASIC14.6□□□□□ -0.07
EBF4Q9BQW3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms