Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.42□□□□□ -0.58
VGLL1Q99990 AC254562.1-201ENST00000417586 456 ntBASIC11.42□□□□□ -0.58
VGLL1Q99990 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.42□□□□□ -0.58
VGLL1Q99990 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.42□□□□□ -0.58
VGLL1Q99990 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VGLL1Q99990 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 CICP17-201ENST00000418553 2377 ntBASIC11.42□□□□□ -0.58
VGLL1Q99990 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
VGLL1Q99990 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.42□□□□□ -0.58
VGLL1Q99990 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VGLL1Q99990 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VGLL1Q99990 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 AC118758.2-201ENST00000614242 2813 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VGLL1Q99990 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CNN2P11-201ENST00000429351 262 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 AP006288.1-201ENST00000446065 395 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 AC004066.1-201ENST00000502488 802 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.41□□□□□ -0.58
VGLL1Q99990 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms