Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AC232323.1-201ENST00000540724 2099 ntBASIC12.42□□□□□ -0.42
GAFA1Q96PS6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AC092135.3-201ENST00000624151 1846 ntBASIC12.42□□□□□ -0.42
GAFA1Q96PS6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 OR8S1-201ENST00000310194 1080 ntBASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AC119751.2-201ENST00000504529 210 ntBASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAFA1Q96PS6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AL354702.1-201ENST00000442006 1960 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 LINC00552-201ENST00000625151 2579 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 MRPL37P1-201ENST00000592451 1337 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC099063.4-201ENST00000641099 1602 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 MIR658-201ENST00000385210 100 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC099336.1-201ENST00000417053 1171 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC023310.1-201ENST00000554836 735 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 C2orf69P2-201ENST00000562032 1123 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AP005482.1-201ENST00000563722 1273 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 MIR4683-201ENST00000579659 81 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC133552.6-201ENST00000613406 534 ntBASIC12.41□□□□□ -0.42
GAFA1Q96PS6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAFA1Q96PS6 AC140479.7-201ENST00000636301 2332 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms