Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 MESTP3-201ENST00000503460 968 ntBASIC13.29□□□□□ -0.28
APH1AQ96BI3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 MIR4259-201ENST00000584466 101 ntBASIC13.29□□□□□ -0.28
APH1AQ96BI3 MIR6752-201ENST00000618442 71 ntBASIC13.29□□□□□ -0.28
APH1AQ96BI3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.29□□□□□ -0.28
APH1AQ96BI3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APH1AQ96BI3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.29□□□□□ -0.28
APH1AQ96BI3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 AC006058.4-201ENST00000624016 1670 ntBASIC13.28□□□□□ -0.28
APH1AQ96BI3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SBF1P1-201ENST00000444527 5631 ntBASIC13.28□□□□□ -0.28
APH1AQ96BI3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 TLE1P1-201ENST00000422965 589 ntBASIC13.28□□□□□ -0.28
APH1AQ96BI3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 COX5BP1-201ENST00000507622 393 ntBASIC13.28□□□□□ -0.28
APH1AQ96BI3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.28□□□□□ -0.28
APH1AQ96BI3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
APH1AQ96BI3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APH1AQ96BI3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.27□□□□□ -0.28
APH1AQ96BI3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.27□□□□□ -0.28
APH1AQ96BI3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
APH1AQ96BI3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
APH1AQ96BI3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 LINC00528-201ENST00000600723 2160 ntBASIC13.27□□□□□ -0.28
APH1AQ96BI3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms