Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AL354989.2-201ENST00000435838 1540 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 BOLA2P3-201ENST00000404566 256 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 RPL7P3-201ENST00000441388 714 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 RN7SL713P-201ENST00000582127 302 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AL162274.1-201ENST00000617191 1098 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 RHOXF1P1-202ENST00000635473 501 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 AC005089.1-201ENST00000619486 2241 ntBASIC13.13□□□□□ -0.31
TMEM54Q969K7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 COX5BP1-201ENST00000507622 393 ntBASIC13.13□□□□□ -0.31
TMEM54Q969K7 KRT17P8-201ENST00000540749 863 ntBASIC13.13□□□□□ -0.31
TMEM54Q969K7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 AC103988.2-201ENST00000561804 725 ntBASIC13.13□□□□□ -0.31
TMEM54Q969K7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms