Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
STAG1Q8WVM7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
STAG1Q8WVM7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
STAG1Q8WVM7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
STAG1Q8WVM7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
STAG1Q8WVM7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 AL590440.2-201ENST00000641973 1595 ntBASIC17.54■□□□□ 0.4
STAG1Q8WVM7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 AL390755.1-201ENST00000623716 2027 ntBASIC17.54■□□□□ 0.4
STAG1Q8WVM7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 MTX1P1-201ENST00000440904 838 ntBASIC17.54■□□□□ 0.4
STAG1Q8WVM7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.54■□□□□ 0.4
STAG1Q8WVM7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
STAG1Q8WVM7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AL118558.3-201ENST00000607414 1079 ntBASIC17.53■□□□□ 0.4
STAG1Q8WVM7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
STAG1Q8WVM7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 AL354877.1-201ENST00000424412 413 ntBASIC17.52■□□□□ 0.4
STAG1Q8WVM7 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
STAG1Q8WVM7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms