Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HSPB1P2-201ENST00000448722 546 ntBASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 RN7SL818P-201ENST00000485099 259 ntBASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 MIR3907-201ENST00000579424 151 ntBASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 RN7SL725P-201ENST00000606439 259 ntBASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NKX2-3Q8TAU0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.58■□□□□ 0.41
NKX2-3Q8TAU0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 GCOM2-201ENST00000509133 1104 ntBASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 AL354702.1-201ENST00000442006 1960 ntBASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-3Q8TAU0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AC006504.5-208ENST00000588784 2401 ntBASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AC134698.3-201ENST00000523880 214 ntBASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AC079336.7-201ENST00000623428 1078 ntBASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-3Q8TAU0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms