Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AC005695.3-201ENST00000614522 232 ntBASIC16.06■□□□□ 0.16
BEST2Q8NFU1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST2Q8NFU1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.05■□□□□ 0.16
BEST2Q8NFU1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST2Q8NFU1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AJ011931.1-201ENST00000618749 2492 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AL354877.1-201ENST00000424412 413 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AC104306.2-201ENST00000451877 341 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AC099548.2-209ENST00000480264 625 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AC008825.2-201ENST00000603374 718 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 BX088702.1-201ENST00000610784 235 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AL008638.5-201ENST00000623814 1298 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 SHC1P1-201ENST00000425230 1745 ntBASIC16.04■□□□□ 0.16
BEST2Q8NFU1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms