Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AC015802.1-201ENST00000588104 1449 ntBASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 RN7SL399P-201ENST00000471648 279 ntBASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AL049840.4-201ENST00000602422 811 ntBASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AC107373.2-201ENST00000607735 490 ntBASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AL390754.1-201ENST00000619088 582 ntBASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS37AQ8NEZ2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.33□□□□□ -0.11
VPS37AQ8NEZ2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 AC055876.3-201ENST00000431496 288 ntBASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 TPRX2P-201ENST00000535362 881 ntBASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 DUX4L27-201ENST00000554796 1261 ntBASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 RRP7BP-205ENST00000566851 833 ntBASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 AC138649.4-201ENST00000612222 287 ntBASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 BX539320.1-201ENST00000623759 877 ntBASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS37AQ8NEZ2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms