Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 AC092580.1-201ENST00000433998 658 ntBASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 AC002044.2-201ENST00000624910 970 ntBASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 AC002472.4-201ENST00000641915 272 ntBASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 HLA-DQB1-202ENST00000399079 1501 ntBASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 AC011471.3-201ENST00000623576 402 ntBASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CFAP43Q8NDM7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 MIR2392-201ENST00000584881 84 ntBASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 AC006504.5-208ENST00000588784 2401 ntBASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 RNA5SP417-201ENST00000516459 108 ntBASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CFAP43Q8NDM7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC22.7■■□□□ 1.23
CFAP43Q8NDM7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC22.7■■□□□ 1.23
CFAP43Q8NDM7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 AC012073.1-201ENST00000606114 1108 ntBASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CFAP43Q8NDM7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 RN7SKP109-201ENST00000410592 316 ntBASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms