Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AC092183.1-201ENST00000469884 875 ntBASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 RFPL4AP1-201ENST00000530883 850 ntBASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN22Q8N7P3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AL158070.2-201ENST00000623713 1621 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 DRD5P1-201ENST00000456605 1438 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 NUS1P3-201ENST00000423502 862 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 GNAQP1-201ENST00000444815 1067 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AL512638.1-201ENST00000457493 794 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC023310.3-201ENST00000557027 670 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC100756.1-201ENST00000562736 682 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC138749.3-201ENST00000567691 622 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC116165.1-201ENST00000611806 668 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 AC087386.2-201ENST00000623212 4637 ntBASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN22Q8N7P3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms