Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 KRT8P18-201ENST00000413425 1445 ntBASIC20.03■□□□□ 0.8
XRN1Q8IZH2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 AC005740.1-201ENST00000515639 522 ntBASIC20.03■□□□□ 0.8
XRN1Q8IZH2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 RN7SL556P-201ENST00000582856 298 ntBASIC20.03■□□□□ 0.8
XRN1Q8IZH2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 AC136621.1-201ENST00000624017 2304 ntBASIC20.03■□□□□ 0.8
XRN1Q8IZH2 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRN1Q8IZH2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 AL451000.1-201ENST00000451300 1186 ntBASIC20.02■□□□□ 0.8
XRN1Q8IZH2 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 MIR5001-201ENST00000580185 100 ntBASIC20.02■□□□□ 0.8
XRN1Q8IZH2 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 HPX-213ENST00000615166 826 ntTSL 5 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.02■□□□□ 0.8
XRN1Q8IZH2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 AC004554.1-201ENST00000422830 1468 ntBASIC20.02■□□□□ 0.79
XRN1Q8IZH2 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 BX679664.3-201ENST00000414070 555 ntBASIC20.02■□□□□ 0.79
XRN1Q8IZH2 HLA-DPA2-205ENST00000433582 733 ntBASIC20.02■□□□□ 0.79
XRN1Q8IZH2 AC113935.1-201ENST00000471722 555 ntBASIC20.02■□□□□ 0.79
XRN1Q8IZH2 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 MAX-218ENST00000557746 571 ntTSL 4 BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 AC023968.2-201ENST00000560593 1049 ntBASIC20.02■□□□□ 0.79
XRN1Q8IZH2 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.02■□□□□ 0.79
XRN1Q8IZH2 AP000769.1-203ENST00000637245 208 ntBASIC20.02■□□□□ 0.79
XRN1Q8IZH2 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.01■□□□□ 0.79
XRN1Q8IZH2 GRPEL2P1-201ENST00000453145 339 ntBASIC20.01■□□□□ 0.79
XRN1Q8IZH2 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms