Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC005077.2-201ENST00000449786 690 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 EIF4HP1-201ENST00000453115 687 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 RPL18P13-201ENST00000478088 569 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC013355.1-201ENST00000562625 723 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC068587.8-201ENST00000641239 219 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 AC018529.2-202ENST00000611482 3087 ntBASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC60Q8IWA6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AL136172.1-201ENST00000598590 1394 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AC018442.1-201ENST00000421439 2061 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 MRPL37P1-201ENST00000592451 1337 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AL008718.2-201ENST00000609206 1313 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AC022217.1-201ENST00000521069 738 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 MIR6720-201ENST00000611664 98 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 AC027601.3-201ENST00000622907 509 ntBASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC60Q8IWA6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC60Q8IWA6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 MBLAC2-202ENST00000514906 1936 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 VDAC1P1-201ENST00000439229 848 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AC106794.1-201ENST00000506935 792 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms