Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 IFNL4P1-201ENST00000607083 540 ntBASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
LYSMD2Q8IV50 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 BX324167.2-201ENST00000623717 3316 ntBASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AC025580.3-201ENST00000617932 1424 ntBASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 DLX4-206ENST00000611342 1662 ntBASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 LILRP1-201ENST00000444199 1370 ntBASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AC018665.1-201ENST00000622927 1362 ntBASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 AL445209.1-201ENST00000607269 3491 ntBASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.16□□□□□ -0.3
LYSMD2Q8IV50 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYSMD2Q8IV50 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms