Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 MIR600HG-201ENST00000449175 5984 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 WASH3P-207ENST00000560956 1394 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 PDIA3P2-201ENST00000428073 158 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 FGFR3P1-201ENST00000449999 601 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 AC126365.1-201ENST00000578585 1514 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 SALL4P5-201ENST00000419001 1760 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 AC244394.1-201ENST00000435000 1665 ntBASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC149Q6ZUS6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AL035414.1-201ENST00000451327 857 ntBASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 HLA-J-204ENST00000495278 958 ntBASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AL160314.3-201ENST00000556041 767 ntBASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AC242376.1-201ENST00000559033 726 ntBASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 BX088702.1-201ENST00000610784 235 ntBASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 AP000845.1-201ENST00000581677 2131 ntBASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC149Q6ZUS6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC149Q6ZUS6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms