Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ACTBP8-201ENST00000403258 1108 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ACTG1P3-201ENST00000431775 1114 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AL162726.2-201ENST00000438986 1017 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC026434.2-201ENST00000506094 1078 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC022616.1-201ENST00000518688 554 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 CU634019.7-201ENST00000624153 1185 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 FP236241.2-201ENST00000624906 1185 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC025048.6-201ENST00000634326 1161 ntBASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
NHLRC1Q6VVB1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 GIMAP3P-201ENST00000495150 836 ntBASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 MSTO2P-201ENST00000314835 1709 ntBASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NHLRC1Q6VVB1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NHLRC1Q6VVB1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms