Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AF186996.4-201ENST00000467186 377 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AL031055.1-201ENST00000606362 631 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 REXO1L6P-202ENST00000619970 1078 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 PCDHB18P-202ENST00000526308 3197 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 FAM90A12P-201ENST00000519497 2375 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 FAM90A24P-201ENST00000520792 2369 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AC084364.1-201ENST00000551967 1556 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AC007787.1-201ENST00000588095 1583 ntBASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.67□□□□□ -0.54
KCNIP4Q6PIL6 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 AC004870.1-201ENST00000315132 882 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 RNU1-129P-201ENST00000384064 167 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PTCHD3P3-201ENST00000403073 906 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 U1.21-201ENST00000580816 167 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 IFNL4P1-201ENST00000607083 540 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 AL691432.1-201ENST00000596308 1422 ntBASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.66□□□□□ -0.54
KCNIP4Q6PIL6 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms