Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC008132.1-202ENST00000342005 1389 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC092506.1-202ENST00000401022 528 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC011742.3-201ENST00000439053 820 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 HLA-J-204ENST00000495278 958 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC024681.1-201ENST00000521917 487 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 RN7SL574P-201ENST00000581512 297 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 CU633904.3-201ENST00000624042 1029 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 AC244394.1-201ENST00000435000 1665 ntBASIC16.77■□□□□ 0.28
CCDC62Q6P9F0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC62Q6P9F0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DBET-201ENST00000630918 3363 ntBASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 AL160314.3-201ENST00000556041 767 ntBASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 AP000346.4-201ENST00000614827 381 ntBASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 AL805961.1-203ENST00000641078 1258 ntBASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC62Q6P9F0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms