Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AC241585.1-201ENST00000433527 519 ntBASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AL390955.2-201ENST00000603032 514 ntBASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPP4R4Q6NUP7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AC027612.1-201ENST00000445234 2395 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AC100757.3-201ENST00000622361 1406 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AC092364.2-202ENST00000597012 1073 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AC138969.3-201ENST00000546612 1459 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AC138932.2-201ENST00000548268 1459 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 AC126755.4-201ENST00000549796 1459 ntBASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PPP4R4Q6NUP7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 AC099521.3-201ENST00000624251 2938 ntBASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 KRT8P37-201ENST00000451609 1420 ntBASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 AC092580.3-201ENST00000430932 139 ntBASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 EEF1DP4-201ENST00000446006 880 ntBASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.43□□□□□ -0.1
PPP4R4Q6NUP7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms