Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AC006372.4-201ENST00000624122 1543 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 MED15P3-201ENST00000413613 326 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 KRT18P4-201ENST00000422599 1288 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ALG1L15P-201ENST00000482834 794 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 NAT9-219ENST00000582524 573 ntTSL 4 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 MIEF1-215ENST00000637854 213 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 FKBP4P8-201ENST00000610931 1369 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 CDCA4P4-201ENST00000435216 680 ntBASIC14.23□□□□□ -0.13
RIF1Q5UIP0 AC025186.1-201ENST00000478174 870 ntBASIC14.23□□□□□ -0.13
RIF1Q5UIP0 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIF1Q5UIP0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 RNVU1-8-201ENST00000364272 125 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 RN7SKP230-201ENST00000365642 335 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 RNASEH2CP1-201ENST00000454281 502 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 AC009090.5-201ENST00000624886 2285 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 NRADDP-201ENST00000437305 691 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 STK24P1-201ENST00000455035 1291 ntBASIC14.22□□□□□ -0.13
RIF1Q5UIP0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RIF1Q5UIP0 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms