Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A21P-201ENST00000510875 1396 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A15P-201ENST00000514465 1395 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A6P-201ENST00000515148 1394 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A16P-201ENST00000526662 1395 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A9P-201ENST00000527940 1395 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A5P-201ENST00000528738 1395 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A14P-201ENST00000530386 1395 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 FAM90A13P-201ENST00000534703 1395 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 AC090136.2-201ENST00000517809 420 ntBASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13DQ5THJ4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 OR2A1-AS1-210ENST00000496968 531 ntBASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC018846.1-201ENST00000568231 183 ntBASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC090510.3-201ENST00000615831 821 ntBASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CTSL-202ENST00000342020 933 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC073869.2-201ENST00000417338 1026 ntBASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC226150.1-201ENST00000544259 466 ntBASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 RARS-210ENST00000626454 177 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS13DQ5THJ4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 RN7SL375P-201ENST00000492442 298 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 NDUFB10P1-201ENST00000567319 521 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms