Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AL355994.2-201ENST00000447882 704 ntBASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRFAM7AQ494W8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC018665.1-201ENST00000622927 1362 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC015656.1-201ENST00000624209 3578 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 RPL5P21-201ENST00000404620 815 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC098850.1-201ENST00000419919 790 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 FAM21FP-201ENST00000426241 1131 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 CTBP2P5-201ENST00000454986 1264 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AL583810.1-201ENST00000553344 1045 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC233724.13-201ENST00000598383 410 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms