Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC011477.6-201ENST00000604980 1927 ntBASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO4Q2I0M5 AL672207.1-201ENST00000328462 1570 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 MIR1301-201ENST00000408518 82 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 GUSBP10-201ENST00000417412 665 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 HLA-K-203ENST00000430151 1046 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 BCL2L12P1-201ENST00000508390 733 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 AC018846.1-201ENST00000568231 183 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 REXO1L5P-201ENST00000622260 2098 ntBASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RSPO4Q2I0M5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.33□□□□□ -0.11
RSPO4Q2I0M5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CYP2T1P-202ENST00000641596 2535 ntBASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 RNA5SP359-201ENST00000364838 113 ntBASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 TREHP1-201ENST00000531328 465 ntBASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RSPO4Q2I0M5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms