Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 OR2R1P-201ENST00000441404 914 ntBASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MIR3188-201ENST00000583494 85 ntBASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC079336.7-201ENST00000623428 1078 ntBASIC17.72■□□□□ 0.43
PDS5AQ29RF7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDS5AQ29RF7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 ST13P19-201ENST00000442505 1124 ntBASIC17.71■□□□□ 0.42
PDS5AQ29RF7 AC242376.1-201ENST00000559033 726 ntBASIC17.71■□□□□ 0.42
PDS5AQ29RF7 AC020922.3-201ENST00000595064 547 ntBASIC17.71■□□□□ 0.42
PDS5AQ29RF7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PDS5AQ29RF7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 FGFR3P5-201ENST00000564496 886 ntBASIC17.7■□□□□ 0.42
PDS5AQ29RF7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms