Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 AC106820.3-201ENST00000561653 397 ntBASIC13.19□□□□□ -0.3
HIST3H3Q16695 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H3Q16695 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.19□□□□□ -0.3
HIST3H3Q16695 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 AL035633.1-201ENST00000406139 838 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 C2orf27AP3-201ENST00000434123 579 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 AC016694.1-201ENST00000434179 700 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 AL354718.3-201ENST00000616414 581 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 AP001002.3-201ENST00000623482 206 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 CR382287.1-201ENST00000623954 586 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 AC020910.5-201ENST00000623668 1865 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 AC026748.1-201ENST00000624349 3251 ntBASIC13.18□□□□□ -0.3
HIST3H3Q16695 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST3H3Q16695 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H3Q16695 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 RN7SKP175-201ENST00000408472 289 ntBASIC13.17□□□□□ -0.3
HIST3H3Q16695 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 FTH1P14-201ENST00000482930 551 ntBASIC13.17□□□□□ -0.3
HIST3H3Q16695 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H3Q16695 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 AC005225.4-201ENST00000557330 545 ntBASIC13.17□□□□□ -0.3
HIST3H3Q16695 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H3Q16695 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms