Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DUX4L47-201ENST00000566374 394 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC055811.4-201ENST00000624039 1754 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 AC236430.1-201ENST00000402231 743 ntBASIC14.46□□□□□ -0.09
HMGCS1Q01581 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 TPT1P11-201ENST00000458482 498 ntBASIC14.46□□□□□ -0.09
HMGCS1Q01581 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.46□□□□□ -0.09
HMGCS1Q01581 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 RN7SL204P-201ENST00000582831 262 ntBASIC14.46□□□□□ -0.09
HMGCS1Q01581 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 LINC02560-201ENST00000596379 459 ntBASIC14.46□□□□□ -0.09
HMGCS1Q01581 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HMGCS1Q01581 AL928921.2-201ENST00000641325 2442 ntBASIC14.46□□□□□ -0.09
HMGCS1Q01581 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCS1Q01581 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCS1Q01581 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HMGCS1Q01581 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCS1Q01581 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCS1Q01581 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HMGCS1Q01581 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCS1Q01581 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCS1Q01581 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.46□□□□□ -0.1
HMGCS1Q01581 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC006504.5-208ENST00000588784 2401 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC007541.1-201ENST00000570282 1469 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC067750.1-201ENST00000608826 6545 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC152010.1-201ENST00000415779 2006 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 KLF2P2-201ENST00000416807 1039 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 SOCS2P1-201ENST00000417727 557 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 DFFBP1-201ENST00000433250 979 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms