Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 NAT9-204ENST00000578822 839 ntTSL 3 BASIC10.37□□□□□ -0.75
PRKDCP78527 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.37□□□□□ -0.75
PRKDCP78527 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PRKDCP78527 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PRKDCP78527 GUCY2EP-203ENST00000531117 1918 ntBASIC10.37□□□□□ -0.75
PRKDCP78527 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC10.37□□□□□ -0.75
PRKDCP78527 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRKDCP78527 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
PRKDCP78527 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 SAT1-201ENST00000379251 801 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 SAT1-202ENST00000379253 909 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 SAT1-203ENST00000379254 868 ntTSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 MIR193A-201ENST00000384882 88 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 PPP1R2P10-201ENST00000393023 595 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 RNF7-205ENST00000480908 782 ntTSL 4 BASIC10.36□□□□□ -0.75
PRKDCP78527 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 SNORD3B-1-201ENST00000577988 758 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.36□□□□□ -0.75
PRKDCP78527 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 AC103702.1-201ENST00000548801 2630 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC10.36□□□□□ -0.75
PRKDCP78527 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 AC093106.1-201ENST00000437271 352 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 BATF-202ENST00000555504 361 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.36□□□□□ -0.75
PRKDCP78527 MIR6165-201ENST00000614803 84 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC10.36□□□□□ -0.75
PRKDCP78527 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
PRKDCP78527 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC10.36□□□□□ -0.75
PRKDCP78527 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC10.36□□□□□ -0.75
PRKDCP78527 RN7SL363P-201ENST00000482412 273 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 AC092284.1-201ENST00000511386 1289 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 AC127002.1-201ENST00000619123 455 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PRKDCP78527 KRT8P18-201ENST00000413425 1445 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRKDCP78527 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.36□□□□□ -0.75
PRKDCP78527 LILRP1-201ENST00000444199 1370 ntBASIC10.36□□□□□ -0.75
PRKDCP78527 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC10.35□□□□□ -0.75
PRKDCP78527 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
PRKDCP78527 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC10.35□□□□□ -0.75
PRKDCP78527 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PRKDCP78527 TPT1P9-201ENST00000413759 514 ntBASIC10.35□□□□□ -0.75
PRKDCP78527 AC092573.1-201ENST00000433054 884 ntBASIC10.35□□□□□ -0.75
PRKDCP78527 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC10.35□□□□□ -0.75
PRKDCP78527 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC10.35□□□□□ -0.75
PRKDCP78527 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 RPL10P8-201ENST00000522888 313 ntBASIC10.35□□□□□ -0.75
PRKDCP78527 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC10.35□□□□□ -0.75
PRKDCP78527 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC10.35□□□□□ -0.75
PRKDCP78527 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
PRKDCP78527 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.35□□□□□ -0.75
PRKDCP78527 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.35□□□□□ -0.75
PRKDCP78527 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PRKDCP78527 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PRKDCP78527 AC139712.1-201ENST00000378256 1875 ntBASIC10.35□□□□□ -0.75
PRKDCP78527 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms