Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
VBP1P61758 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.46□□□□□ -0.26
VBP1P61758 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
VBP1P61758 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
VBP1P61758 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
VBP1P61758 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.45□□□□□ -0.26
VBP1P61758 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.45□□□□□ -0.26
VBP1P61758 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.45□□□□□ -0.26
VBP1P61758 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 RN7SL850P-201ENST00000579959 291 ntBASIC13.45□□□□□ -0.26
VBP1P61758 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 AL161645.1-201ENST00000622716 1255 ntBASIC13.45□□□□□ -0.26
VBP1P61758 AL645728.2-202ENST00000641679 227 ntBASIC13.45□□□□□ -0.26
VBP1P61758 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.45□□□□□ -0.26
VBP1P61758 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
VBP1P61758 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VBP1P61758 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VBP1P61758 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.45□□□□□ -0.26
VBP1P61758 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
VBP1P61758 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms