Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.61□□□□□ -0.71
CKS1BP61024 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.61□□□□□ -0.71
CKS1BP61024 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 AC140658.5-201ENST00000438532 169 ntBASIC10.61□□□□□ -0.71
CKS1BP61024 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.61□□□□□ -0.71
CKS1BP61024 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CKS1BP61024 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.61□□□□□ -0.71
CKS1BP61024 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CKS1BP61024 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CKS1BP61024 VENTXP1-201ENST00000569334 2716 ntBASIC10.61□□□□□ -0.71
CKS1BP61024 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.61□□□□□ -0.71
CKS1BP61024 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.6□□□□□ -0.71
CKS1BP61024 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 AC126365.1-201ENST00000578585 1514 ntBASIC10.6□□□□□ -0.71
CKS1BP61024 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS1BP61024 MIR1224-201ENST00000408193 85 ntBASIC10.6□□□□□ -0.71
CKS1BP61024 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS1BP61024 AL645939.2-201ENST00000427340 991 ntBASIC10.6□□□□□ -0.71
CKS1BP61024 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS1BP61024 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CKS1BP61024 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS1BP61024 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms