Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CLUHP2-201ENST00000426660 1303 ntBASIC14.38□□□□□ -0.11
VSX2P58304 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.38□□□□□ -0.11
VSX2P58304 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.37□□□□□ -0.11
VSX2P58304 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 ACE3P-201ENST00000423435 1973 ntBASIC14.37□□□□□ -0.11
VSX2P58304 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.37□□□□□ -0.11
VSX2P58304 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.37□□□□□ -0.11
VSX2P58304 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.37□□□□□ -0.11
VSX2P58304 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.37□□□□□ -0.11
VSX2P58304 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 AC010328.2-201ENST00000597698 1111 ntBASIC14.37□□□□□ -0.11
VSX2P58304 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 AC138466.3-201ENST00000619983 221 ntBASIC14.37□□□□□ -0.11
VSX2P58304 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VSX2P58304 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.37□□□□□ -0.11
VSX2P58304 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VSX2P58304 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VSX2P58304 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VSX2P58304 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.36□□□□□ -0.11
VSX2P58304 FTLP10-202ENST00000505798 471 ntBASIC14.36□□□□□ -0.11
VSX2P58304 AL391280.1-201ENST00000506969 1062 ntBASIC14.36□□□□□ -0.11
VSX2P58304 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.36□□□□□ -0.11
VSX2P58304 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.36□□□□□ -0.11
VSX2P58304 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VSX2P58304 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 AC009542.2-202ENST00000619004 1067 ntBASIC14.36□□□□□ -0.11
VSX2P58304 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.36□□□□□ -0.11
VSX2P58304 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VSX2P58304 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 AC023090.2-201ENST00000625182 2110 ntBASIC14.36□□□□□ -0.11
VSX2P58304 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VSX2P58304 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.36□□□□□ -0.11
VSX2P58304 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms