Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.09□□□□□ -0.31
FOXG1P55316 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
FOXG1P55316 MIR4783-201ENST00000580343 82 ntBASIC13.09□□□□□ -0.31
FOXG1P55316 EEF1DP1-201ENST00000585891 896 ntBASIC13.09□□□□□ -0.31
FOXG1P55316 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.09□□□□□ -0.31
FOXG1P55316 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.09□□□□□ -0.31
FOXG1P55316 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.09□□□□□ -0.31
FOXG1P55316 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
FOXG1P55316 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.09□□□□□ -0.31
FOXG1P55316 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXG1P55316 AC103702.1-201ENST00000548801 2630 ntBASIC13.09□□□□□ -0.31
FOXG1P55316 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FOXG1P55316 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
FOXG1P55316 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
FOXG1P55316 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
FOXG1P55316 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
FOXG1P55316 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
FOXG1P55316 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.08□□□□□ -0.31
FOXG1P55316 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
FOXG1P55316 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
FOXG1P55316 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 TLE1P1-201ENST00000422965 589 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.08□□□□□ -0.32
FOXG1P55316 ACTBP11-201ENST00000436287 1126 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 AC108725.1-201ENST00000495472 409 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 AC092658.1-201ENST00000505836 891 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.08□□□□□ -0.32
FOXG1P55316 AC131206.1-201ENST00000538078 1211 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.08□□□□□ -0.32
FOXG1P55316 AL096828.3-201ENST00000615354 462 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.08□□□□□ -0.32
FOXG1P55316 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 INTS4P1-203ENST00000641008 3683 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.08□□□□□ -0.32
FOXG1P55316 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 AC015818.8-201ENST00000587907 1519 ntBASIC13.08□□□□□ -0.32
FOXG1P55316 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FOXG1P55316 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.08□□□□□ -0.32
FOXG1P55316 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.08□□□□□ -0.32
FOXG1P55316 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 AC015656.1-201ENST00000624209 3578 ntBASIC13.07□□□□□ -0.32
FOXG1P55316 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms