Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SPDYE9P-201ENST00000570642 692 ntBASIC14.06□□□□□ -0.16
CDH15P55291 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.06□□□□□ -0.16
CDH15P55291 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.06□□□□□ -0.16
CDH15P55291 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH15P55291 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.06□□□□□ -0.16
CDH15P55291 AC099522.2-201ENST00000607001 744 ntBASIC14.06□□□□□ -0.16
CDH15P55291 SPDYE10P-202ENST00000612005 668 ntBASIC14.06□□□□□ -0.16
CDH15P55291 SPDYE8P-202ENST00000612377 668 ntBASIC14.06□□□□□ -0.16
CDH15P55291 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH15P55291 AL161645.1-201ENST00000622716 1255 ntBASIC14.06□□□□□ -0.16
CDH15P55291 LINC00628-201ENST00000628516 1289 ntBASIC14.06□□□□□ -0.16
CDH15P55291 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CDH15P55291 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH15P55291 AC023794.5-201ENST00000564380 2157 ntBASIC14.06□□□□□ -0.16
CDH15P55291 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH15P55291 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDH15P55291 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH15P55291 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDH15P55291 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 CICP16-201ENST00000502609 2813 ntBASIC14.05□□□□□ -0.16
CDH15P55291 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 AC068760.1-201ENST00000493579 1953 ntBASIC14.05□□□□□ -0.16
CDH15P55291 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 AL607033.1-201ENST00000623900 1599 ntBASIC14.05□□□□□ -0.16
CDH15P55291 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH15P55291 AL627223.1-201ENST00000416693 442 ntBASIC14.05□□□□□ -0.16
CDH15P55291 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH15P55291 RN7SL589P-201ENST00000481268 310 ntBASIC14.05□□□□□ -0.16
CDH15P55291 AC109322.1-201ENST00000524499 1264 ntBASIC14.05□□□□□ -0.16
CDH15P55291 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH15P55291 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 AC093512.1-201ENST00000617969 520 ntBASIC14.05□□□□□ -0.16
CDH15P55291 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH15P55291 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDH15P55291 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CDH15P55291 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDH15P55291 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH15P55291 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH15P55291 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH15P55291 AC012617.1-204ENST00000586340 2305 ntBASIC14.04□□□□□ -0.16
CDH15P55291 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDH15P55291 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH15P55291 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH15P55291 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH15P55291 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH15P55291 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH15P55291 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH15P55291 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms