Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC073347.1-201ENST00000421633 2643 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA4P54764 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.38□□□□□ -0.11
EPHA4P54764 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 MIR600HG-201ENST00000449175 5984 ntBASIC14.38□□□□□ -0.11
EPHA4P54764 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EPHA4P54764 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
EPHA4P54764 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.38□□□□□ -0.11
EPHA4P54764 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.38□□□□□ -0.11
EPHA4P54764 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.38□□□□□ -0.11
EPHA4P54764 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 RN7SL163P-201ENST00000583100 276 ntBASIC14.38□□□□□ -0.11
EPHA4P54764 AC005324.6-201ENST00000587972 613 ntBASIC14.38□□□□□ -0.11
EPHA4P54764 NDUFV2P1-201ENST00000596415 907 ntBASIC14.38□□□□□ -0.11
EPHA4P54764 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EPHA4P54764 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EPHA4P54764 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 AC013268.4-201ENST00000637413 2228 ntBASIC14.38□□□□□ -0.11
EPHA4P54764 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EPHA4P54764 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA4P54764 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA4P54764 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 DPM3-202ENST00000368399 517 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms