Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN3P51790 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 TCAF2P1-201ENST00000291129 2421 ntBASIC16.34■□□□□ 0.21
CLCN3P51790 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 ACTG1P2-201ENST00000415776 1125 ntBASIC16.34■□□□□ 0.21
CLCN3P51790 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 ACTG1P11-201ENST00000425411 1125 ntBASIC16.34■□□□□ 0.21
CLCN3P51790 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 AC008805.1-201ENST00000590892 364 ntBASIC16.34■□□□□ 0.21
CLCN3P51790 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.34■□□□□ 0.21
CLCN3P51790 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLCN3P51790 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN3P51790 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN3P51790 AC091544.8-201ENST00000619490 361 ntBASIC16.34■□□□□ 0.21
CLCN3P51790 AC027601.3-201ENST00000622907 509 ntBASIC16.34■□□□□ 0.21
CLCN3P51790 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN3P51790 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN3P51790 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN3P51790 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.33■□□□□ 0.21
CLCN3P51790 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLCN3P51790 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.33■□□□□ 0.21
CLCN3P51790 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
CLCN3P51790 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN3P51790 AC023157.3-201ENST00000619086 2088 ntBASIC16.33■□□□□ 0.21
CLCN3P51790 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN3P51790 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CLCN3P51790 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLCN3P51790 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN3P51790 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN3P51790 AC011742.3-201ENST00000439053 820 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 FAM58BP-201ENST00000439056 645 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 VDAC1P1-201ENST00000439229 848 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 AC012441.2-201ENST00000444843 739 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 RN7SL11P-201ENST00000471305 293 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLCN3P51790 RN7SL774P-201ENST00000577467 290 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLCN3P51790 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.33■□□□□ 0.2
CLCN3P51790 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLCN3P51790 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 AL136172.1-201ENST00000598590 1394 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLCN3P51790 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLCN3P51790 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN3P51790 AC126177.1-201ENST00000547829 2218 ntBASIC16.33■□□□□ 0.2
CLCN3P51790 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN3P51790 NORAD-201ENST00000565493 5339 ntBASIC16.32■□□□□ 0.2
CLCN3P51790 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN3P51790 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLCN3P51790 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN3P51790 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN3P51790 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN3P51790 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 MIR769-201ENST00000390225 118 ntBASIC16.32■□□□□ 0.2
CLCN3P51790 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.32■□□□□ 0.2
CLCN3P51790 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN3P51790 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN3P51790 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN3P51790 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms