Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC6A12P48065 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC6A12P48065 AL590440.2-201ENST00000641973 1595 ntBASIC14.39□□□□□ -0.11
SLC6A12P48065 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC015688.4-201ENST00000580780 1647 ntBASIC14.38□□□□□ -0.11
SLC6A12P48065 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.38□□□□□ -0.11
SLC6A12P48065 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
SLC6A12P48065 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SLC6A12P48065 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC016694.1-201ENST00000434179 700 ntBASIC14.38□□□□□ -0.11
SLC6A12P48065 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 KRT90P-201ENST00000549264 1064 ntBASIC14.38□□□□□ -0.11
SLC6A12P48065 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC6A12P48065 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC6A12P48065 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC105233.6-201ENST00000642093 218 ntBASIC14.38□□□□□ -0.11
SLC6A12P48065 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC090505.1-201ENST00000430515 1834 ntBASIC14.38□□□□□ -0.11
SLC6A12P48065 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SLC6A12P48065 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 AC139712.1-201ENST00000378256 1875 ntBASIC14.38□□□□□ -0.11
SLC6A12P48065 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC6A12P48065 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC6A12P48065 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.37□□□□□ -0.11
SLC6A12P48065 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC6A12P48065 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SLC6A12P48065 KHSRPP1-201ENST00000427983 1768 ntBASIC14.37□□□□□ -0.11
SLC6A12P48065 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC6A12P48065 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLC6A12P48065 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SLC6A12P48065 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms