Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RFC3P40938 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 AL360270.3-201ENST00000609118 1348 ntBASIC13.76□□□□□ -0.21
RFC3P40938 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RFC3P40938 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RFC3P40938 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.76□□□□□ -0.21
RFC3P40938 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.76□□□□□ -0.21
RFC3P40938 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RFC3P40938 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 AL096828.3-201ENST00000615354 462 ntBASIC13.76□□□□□ -0.21
RFC3P40938 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 MIR600HG-201ENST00000449175 5984 ntBASIC13.76□□□□□ -0.21
RFC3P40938 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.75□□□□□ -0.21
RFC3P40938 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.75□□□□□ -0.21
RFC3P40938 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 SSR4P1-203ENST00000599569 2260 ntBASIC13.75□□□□□ -0.21
RFC3P40938 AC013268.4-201ENST00000637413 2228 ntBASIC13.75□□□□□ -0.21
RFC3P40938 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 AC023024.2-201ENST00000623561 1993 ntBASIC13.75□□□□□ -0.21
RFC3P40938 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.75□□□□□ -0.21
RFC3P40938 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 MIR1247-201ENST00000408206 136 ntBASIC13.75□□□□□ -0.21
RFC3P40938 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.75□□□□□ -0.21
RFC3P40938 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 AL591846.1-201ENST00000451736 433 ntBASIC13.75□□□□□ -0.21
RFC3P40938 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 AP003171.2-201ENST00000528208 925 ntBASIC13.75□□□□□ -0.21
RFC3P40938 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.75□□□□□ -0.21
RFC3P40938 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.75□□□□□ -0.21
RFC3P40938 AC073413.1-201ENST00000603927 732 ntBASIC13.75□□□□□ -0.21
RFC3P40938 AL022328.3-201ENST00000607943 679 ntBASIC13.75□□□□□ -0.21
RFC3P40938 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.75□□□□□ -0.21
RFC3P40938 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.75□□□□□ -0.21
RFC3P40938 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.75□□□□□ -0.21
RFC3P40938 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.75□□□□□ -0.21
RFC3P40938 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.75□□□□□ -0.21
RFC3P40938 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RFC3P40938 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFC3P40938 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.75□□□□□ -0.21
RFC3P40938 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms