Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCLP35914 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCLP35914 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMGCLP35914 AL136172.1-201ENST00000598590 1394 ntBASIC14.86□□□□□ -0.03
HMGCLP35914 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HMGCLP35914 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCLP35914 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCLP35914 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGCLP35914 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HMGCLP35914 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCLP35914 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGCLP35914 CSF2RBP1-201ENST00000447905 391 ntBASIC14.86□□□□□ -0.03
HMGCLP35914 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.86□□□□□ -0.03
HMGCLP35914 IGHV3-71-201ENST00000523324 359 ntBASIC14.86□□□□□ -0.03
HMGCLP35914 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGCLP35914 COX11-210ENST00000639671 696 ntBASIC14.86□□□□□ -0.03
HMGCLP35914 AC002472.3-201ENST00000640124 621 ntBASIC14.86□□□□□ -0.03
HMGCLP35914 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCLP35914 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCLP35914 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HMGCLP35914 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCLP35914 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCLP35914 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCLP35914 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCLP35914 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 HLA-V-201ENST00000429037 534 ntBASIC14.85□□□□□ -0.03
HMGCLP35914 AL355994.2-201ENST00000447882 704 ntBASIC14.85□□□□□ -0.03
HMGCLP35914 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.85□□□□□ -0.03
HMGCLP35914 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCLP35914 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGCLP35914 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 AC133552.6-201ENST00000613406 534 ntBASIC14.85□□□□□ -0.03
HMGCLP35914 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCLP35914 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 AGGF1P1-201ENST00000509500 2073 ntBASIC14.85□□□□□ -0.03
HMGCLP35914 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCLP35914 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HMGCLP35914 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms