Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 EEF1DP4-201ENST00000446006 880 ntBASIC17.1■□□□□ 0.33
CLCN1P35523 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN1P35523 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CLCN1P35523 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN1P35523 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN1P35523 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN1P35523 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 AC018529.1-201ENST00000613063 361 ntBASIC17.1■□□□□ 0.33
CLCN1P35523 AC009093.7-201ENST00000623853 1223 ntBASIC17.1■□□□□ 0.33
CLCN1P35523 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.1■□□□□ 0.33
CLCN1P35523 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN1P35523 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCN1P35523 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC17.1■□□□□ 0.33
CLCN1P35523 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN1P35523 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN1P35523 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 AP000845.1-201ENST00000581677 2131 ntBASIC17.09■□□□□ 0.33
CLCN1P35523 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.09■□□□□ 0.33
CLCN1P35523 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN1P35523 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 AC026150.2-201ENST00000564693 1156 ntBASIC17.09■□□□□ 0.33
CLCN1P35523 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLCN1P35523 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN1P35523 KRT8P37-201ENST00000451609 1420 ntBASIC17.09■□□□□ 0.33
CLCN1P35523 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.09■□□□□ 0.33
CLCN1P35523 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLCN1P35523 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLCN1P35523 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN1P35523 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CLCN1P35523 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 BX324167.2-201ENST00000623717 3316 ntBASIC17.08■□□□□ 0.33
CLCN1P35523 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.08■□□□□ 0.33
CLCN1P35523 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.08■□□□□ 0.33
CLCN1P35523 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN1P35523 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.33
CLCN1P35523 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN1P35523 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN1P35523 AC254562.1-201ENST00000417586 456 ntBASIC17.08■□□□□ 0.32
CLCN1P35523 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms