Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.01■□□□□ 0.63
RXRBP28702 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.01■□□□□ 0.63
RXRBP28702 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RXRBP28702 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.01■□□□□ 0.63
RXRBP28702 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC19.01■□□□□ 0.63
RXRBP28702 AC093106.1-201ENST00000437271 352 ntBASIC19.01■□□□□ 0.63
RXRBP28702 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.01■□□□□ 0.63
RXRBP28702 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.01■□□□□ 0.63
RXRBP28702 AP000533.1-201ENST00000456143 1177 ntBASIC19.01■□□□□ 0.63
RXRBP28702 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.01■□□□□ 0.63
RXRBP28702 CCNL2P1-201ENST00000512846 969 ntBASIC19.01■□□□□ 0.63
RXRBP28702 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC19.01■□□□□ 0.63
RXRBP28702 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19.01■□□□□ 0.63
RXRBP28702 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.01■□□□□ 0.63
RXRBP28702 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19.01■□□□□ 0.63
RXRBP28702 BX322534.1-201ENST00000635574 241 ntBASIC19.01■□□□□ 0.63
RXRBP28702 AC215524.1-201ENST00000635696 241 ntBASIC19.01■□□□□ 0.63
RXRBP28702 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.01■□□□□ 0.63
RXRBP28702 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RXRBP28702 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC19■□□□□ 0.63
RXRBP28702 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19■□□□□ 0.63
RXRBP28702 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RXRBP28702 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RXRBP28702 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
RXRBP28702 THAP4-203ENST00000402545 833 ntTSL 5 BASIC19■□□□□ 0.63
RXRBP28702 ASS1P1-201ENST00000402854 1237 ntBASIC19■□□□□ 0.63
RXRBP28702 RN7SKP212-201ENST00000410851 328 ntBASIC19■□□□□ 0.63
RXRBP28702 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC19■□□□□ 0.63
RXRBP28702 AL359092.2-201ENST00000423330 585 ntBASIC19■□□□□ 0.63
RXRBP28702 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC19■□□□□ 0.63
RXRBP28702 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC19■□□□□ 0.63
RXRBP28702 NAT9-204ENST00000578822 839 ntTSL 3 BASIC19■□□□□ 0.63
RXRBP28702 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19■□□□□ 0.63
RXRBP28702 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19■□□□□ 0.63
RXRBP28702 AL009176.1-201ENST00000607876 650 ntBASIC19■□□□□ 0.63
RXRBP28702 AL590556.2-202ENST00000636906 844 ntBASIC19■□□□□ 0.63
RXRBP28702 MIEF1-215ENST00000637854 213 ntBASIC19■□□□□ 0.63
RXRBP28702 F10-203ENST00000409306 1450 ntTSL 3 BASIC19■□□□□ 0.63
RXRBP28702 FAM226B-201ENST00000602508 1490 ntBASIC19■□□□□ 0.63
RXRBP28702 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
RXRBP28702 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RXRBP28702 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RXRBP28702 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RXRBP28702 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RXRBP28702 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC19■□□□□ 0.63
RXRBP28702 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RXRBP28702 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 FTH1P18-201ENST00000412071 549 ntBASIC18.99■□□□□ 0.63
RXRBP28702 RN7SKP155-201ENST00000516031 288 ntBASIC18.99■□□□□ 0.63
RXRBP28702 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC18.99■□□□□ 0.63
RXRBP28702 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.99■□□□□ 0.63
RXRBP28702 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 AC087072.1-201ENST00000603727 421 ntBASIC18.99■□□□□ 0.63
RXRBP28702 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC18.99■□□□□ 0.63
RXRBP28702 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 1220.8 ms