Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 AC008825.2-201ENST00000603374 718 ntBASIC12.88□□□□□ -0.35
CD40P25942 AL023803.2-201ENST00000620080 638 ntBASIC12.88□□□□□ -0.35
CD40P25942 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CD40P25942 KRT8P29-201ENST00000420409 1371 ntBASIC12.88□□□□□ -0.35
CD40P25942 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 AC006486.2-201ENST00000624246 2199 ntBASIC12.88□□□□□ -0.35
CD40P25942 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40P25942 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 AC091951.1-201ENST00000512854 2465 ntBASIC12.87□□□□□ -0.35
CD40P25942 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.87□□□□□ -0.35
CD40P25942 AC010141.1-201ENST00000411585 623 ntBASIC12.87□□□□□ -0.35
CD40P25942 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.87□□□□□ -0.35
CD40P25942 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 AC020914.3-201ENST00000594712 304 ntBASIC12.87□□□□□ -0.35
CD40P25942 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.87□□□□□ -0.35
CD40P25942 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.87□□□□□ -0.35
CD40P25942 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40P25942 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40P25942 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40P25942 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CD40P25942 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms