Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.06□□□□□ -0.16
CHMP24386 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 AC012508.2-201ENST00000567613 1472 ntBASIC14.06□□□□□ -0.16
CHMP24386 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.06□□□□□ -0.16
CHMP24386 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 AL512384.1-201ENST00000406683 331 ntBASIC14.06□□□□□ -0.16
CHMP24386 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.06□□□□□ -0.16
CHMP24386 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.06□□□□□ -0.16
CHMP24386 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 AL162726.2-201ENST00000438986 1017 ntBASIC14.06□□□□□ -0.16
CHMP24386 ENPP7P5-201ENST00000541031 1031 ntBASIC14.06□□□□□ -0.16
CHMP24386 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.06□□□□□ -0.16
CHMP24386 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
CHMP24386 AL033527.5-201ENST00000641382 801 ntBASIC14.06□□□□□ -0.16
CHMP24386 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 INTS4P2-202ENST00000614726 2019 ntBASIC14.06□□□□□ -0.16
CHMP24386 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CHMP24386 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHMP24386 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHMP24386 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CHMP24386 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CHMP24386 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 SOCS2P1-201ENST00000417727 557 ntBASIC14.05□□□□□ -0.16
CHMP24386 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.05□□□□□ -0.16
CHMP24386 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.05□□□□□ -0.16
CHMP24386 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.05□□□□□ -0.16
CHMP24386 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.05□□□□□ -0.16
CHMP24386 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHMP24386 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms