Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCND1P24385 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
CCND1P24385 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.17■□□□□ 0.02
CCND1P24385 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCND1P24385 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCND1P24385 AC015802.1-201ENST00000588104 1449 ntBASIC15.17■□□□□ 0.02
CCND1P24385 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCND1P24385 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.17■□□□□ 0.02
CCND1P24385 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCND1P24385 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.16■□□□□ 0.02
CCND1P24385 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.16■□□□□ 0.02
CCND1P24385 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 AC004461.2-201ENST00000629517 803 ntBASIC15.16■□□□□ 0.02
CCND1P24385 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCND1P24385 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCND1P24385 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CCND1P24385 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.15■□□□□ 0.02
CCND1P24385 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.15■□□□□ 0.02
CCND1P24385 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 AC135586.1-201ENST00000539323 574 ntBASIC15.15■□□□□ 0.02
CCND1P24385 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.15■□□□□ 0.02
CCND1P24385 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.15■□□□□ 0.02
CCND1P24385 AC027796.2-201ENST00000575326 344 ntBASIC15.15■□□□□ 0.02
CCND1P24385 AF228730.6-201ENST00000641497 218 ntBASIC15.15■□□□□ 0.02
CCND1P24385 AC084121.3-201ENST00000641716 218 ntBASIC15.15■□□□□ 0.02
CCND1P24385 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.15■□□□□ 0.02
CCND1P24385 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCND1P24385 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCND1P24385 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCND1P24385 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms