Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC005562.1-201ENST00000583030 3219 ntBASIC14.2□□□□□ -0.14
NCK1P16333 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NCK1P16333 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.2□□□□□ -0.14
NCK1P16333 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.2□□□□□ -0.14
NCK1P16333 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NCK1P16333 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.2□□□□□ -0.14
NCK1P16333 AC004066.1-201ENST00000502488 802 ntBASIC14.2□□□□□ -0.14
NCK1P16333 POLD2P1-201ENST00000511220 997 ntBASIC14.2□□□□□ -0.14
NCK1P16333 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.2□□□□□ -0.14
NCK1P16333 AL512361.1-201ENST00000554200 418 ntBASIC14.2□□□□□ -0.14
NCK1P16333 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.2□□□□□ -0.14
NCK1P16333 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.2□□□□□ -0.14
NCK1P16333 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 AL109936.8-201ENST00000641772 604 ntBASIC14.2□□□□□ -0.14
NCK1P16333 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.2□□□□□ -0.14
NCK1P16333 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 KRT8P22-201ENST00000562317 1415 ntBASIC14.2□□□□□ -0.14
NCK1P16333 PPT1-213ENST00000641319 2388 ntBASIC14.2□□□□□ -0.14
NCK1P16333 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.2□□□□□ -0.14
NCK1P16333 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NCK1P16333 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.2□□□□□ -0.14
NCK1P16333 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NCK1P16333 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NCK1P16333 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NCK1P16333 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 HLA-K-203ENST00000430151 1046 ntBASIC14.19□□□□□ -0.14
NCK1P16333 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.19□□□□□ -0.14
NCK1P16333 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.19□□□□□ -0.14
NCK1P16333 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.19□□□□□ -0.14
NCK1P16333 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
NCK1P16333 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms