Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 AC126177.1-201ENST00000547829 2218 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 AC025271.4-201ENST00000621477 1726 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL11A1P12107 AL357563.1-201ENST00000404728 395 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 HIST2H2BA-201ENST00000412169 381 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.59■□□□□ 0.25
COL11A1P12107 ALG1L13P-202ENST00000519320 584 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 DNM1P30-201ENST00000563586 452 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.59■□□□□ 0.25
COL11A1P12107 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
COL11A1P12107 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COL11A1P12107 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.58■□□□□ 0.25
COL11A1P12107 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL11A1P12107 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COL11A1P12107 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.58■□□□□ 0.25
COL11A1P12107 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
COL11A1P12107 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
COL11A1P12107 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
COL11A1P12107 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL11A1P12107 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
COL11A1P12107 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL11A1P12107 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COL11A1P12107 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.58■□□□□ 0.24
COL11A1P12107 KRT17P5-201ENST00000332088 839 ntBASIC16.58■□□□□ 0.24
COL11A1P12107 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 AC130709.1-201ENST00000484779 1212 ntBASIC16.58■□□□□ 0.24
COL11A1P12107 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.58■□□□□ 0.24
COL11A1P12107 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.58■□□□□ 0.24
COL11A1P12107 AC090502.4-201ENST00000551714 1386 ntBASIC16.58■□□□□ 0.24
COL11A1P12107 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
COL11A1P12107 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.58■□□□□ 0.24
COL11A1P12107 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL11A1P12107 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
COL11A1P12107 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.57■□□□□ 0.24
COL11A1P12107 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.57■□□□□ 0.24
COL11A1P12107 AL031713.1-201ENST00000564813 661 ntBASIC16.57■□□□□ 0.24
COL11A1P12107 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL11A1P12107 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.57■□□□□ 0.24
COL11A1P12107 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.57■□□□□ 0.24
COL11A1P12107 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.57■□□□□ 0.24
COL11A1P12107 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms