Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.58□□□□□ -0.24
FREM3P0C091 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 AC245100.3-201ENST00000441281 285 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 SERPINA13P-202ENST00000478994 924 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 ALG3P1-201ENST00000508806 1114 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 FAM86HP-204ENST00000513466 959 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 AP006547.1-201ENST00000563435 692 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.58□□□□□ -0.24
FREM3P0C091 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
FREM3P0C091 MIR6799-201ENST00000620297 69 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
FREM3P0C091 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
FREM3P0C091 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
FREM3P0C091 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 ACTBP11-201ENST00000436287 1126 ntBASIC13.57□□□□□ -0.24
FREM3P0C091 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.57□□□□□ -0.24
FREM3P0C091 AL096828.3-201ENST00000615354 462 ntBASIC13.57□□□□□ -0.24
FREM3P0C091 MIR6869-201ENST00000619434 62 ntBASIC13.57□□□□□ -0.24
FREM3P0C091 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
FREM3P0C091 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
FREM3P0C091 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.57□□□□□ -0.24
FREM3P0C091 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.57□□□□□ -0.24
FREM3P0C091 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 TLE1P1-201ENST00000422965 589 ntBASIC13.57□□□□□ -0.24
FREM3P0C091 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.57□□□□□ -0.24
FREM3P0C091 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 AC020910.5-201ENST00000623668 1865 ntBASIC13.57□□□□□ -0.24
FREM3P0C091 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
FREM3P0C091 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FREM3P0C091 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.57□□□□□ -0.24
FREM3P0C091 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.56□□□□□ -0.24
FREM3P0C091 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 LILRP1-201ENST00000444199 1370 ntBASIC13.56□□□□□ -0.24
FREM3P0C091 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
FREM3P0C091 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
FREM3P0C091 AC003102.2-201ENST00000589195 1469 ntBASIC13.56□□□□□ -0.24
FREM3P0C091 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
FREM3P0C091 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.56□□□□□ -0.24
FREM3P0C091 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.56□□□□□ -0.24
FREM3P0C091 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FREM3P0C091 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms