Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC015688.4-201ENST00000580780 1647 ntBASIC16.69■□□□□ 0.26
CYP3A4P08684 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.69■□□□□ 0.26
CYP3A4P08684 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CYP3A4P08684 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CYP3A4P08684 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CYP3A4P08684 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CYP3A4P08684 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.69■□□□□ 0.26
CYP3A4P08684 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.69■□□□□ 0.26
CYP3A4P08684 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CYP3A4P08684 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CYP3A4P08684 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CYP3A4P08684 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CYP3A4P08684 AGGF1P1-201ENST00000509500 2073 ntBASIC16.68■□□□□ 0.26
CYP3A4P08684 AC004899.1-201ENST00000424687 1714 ntBASIC16.68■□□□□ 0.26
CYP3A4P08684 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CYP3A4P08684 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CYP3A4P08684 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.68■□□□□ 0.26
CYP3A4P08684 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.68■□□□□ 0.26
CYP3A4P08684 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.68■□□□□ 0.26
CYP3A4P08684 AC091804.1-201ENST00000486888 567 ntBASIC16.68■□□□□ 0.26
CYP3A4P08684 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.68■□□□□ 0.26
CYP3A4P08684 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.68■□□□□ 0.26
CYP3A4P08684 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CYP3A4P08684 AL160314.3-201ENST00000556041 767 ntBASIC16.68■□□□□ 0.26
CYP3A4P08684 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 AC009884.2-201ENST00000603110 324 ntBASIC16.68■□□□□ 0.26
CYP3A4P08684 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CYP3A4P08684 AC068587.8-201ENST00000641239 219 ntBASIC16.68■□□□□ 0.26
CYP3A4P08684 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.68■□□□□ 0.26
CYP3A4P08684 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.68■□□□□ 0.26
CYP3A4P08684 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.68■□□□□ 0.26
CYP3A4P08684 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.68■□□□□ 0.26
CYP3A4P08684 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CYP3A4P08684 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CYP3A4P08684 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CYP3A4P08684 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CYP3A4P08684 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 AL390755.1-201ENST00000623716 2027 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 TMBIM7P-202ENST00000641474 1516 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CYP3A4P08684 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 NKAIN1P1-201ENST00000435754 582 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 VDAC1P1-201ENST00000439229 848 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.67■□□□□ 0.26
CYP3A4P08684 RPL18P13-201ENST00000478088 569 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 HLA-J-204ENST00000495278 958 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 AC044849.1-201ENST00000519737 1188 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.67■□□□□ 0.26
CYP3A4P08684 RN7SL163P-201ENST00000583100 276 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 MIR6787-201ENST00000616675 61 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.67■□□□□ 0.26
CYP3A4P08684 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.67■□□□□ 0.26
CYP3A4P08684 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CYP3A4P08684 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CYP3A4P08684 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.67■□□□□ 0.26
CYP3A4P08684 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CYP3A4P08684 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.67■□□□□ 0.26
CYP3A4P08684 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
CYP3A4P08684 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms