Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
HMGN1P05114 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HMGN1P05114 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.63□□□□□ -0.23
HMGN1P05114 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 AC112482.1-201ENST00000492080 688 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.63□□□□□ -0.23
HMGN1P05114 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.63□□□□□ -0.23
HMGN1P05114 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.63□□□□□ -0.23
HMGN1P05114 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.63□□□□□ -0.23
HMGN1P05114 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.63□□□□□ -0.23
HMGN1P05114 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 MST1P2-201ENST00000457982 2291 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HMGN1P05114 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HMGN1P05114 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HMGN1P05114 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 AC087499.5-201ENST00000452760 1342 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 AC093525.8-201ENST00000624099 1342 ntBASIC13.63□□□□□ -0.23
HMGN1P05114 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGN1P05114 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.63□□□□□ -0.23
HMGN1P05114 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGN1P05114 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HMGN1P05114 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.62□□□□□ -0.23
HMGN1P05114 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.62□□□□□ -0.23
HMGN1P05114 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 AC011474.4-201ENST00000623523 2076 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGN1P05114 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HMGN1P05114 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 AC211486.1-202ENST00000416371 468 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 AC254562.1-201ENST00000417586 456 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 HLA-K-203ENST00000430151 1046 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.62□□□□□ -0.23
HMGN1P05114 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.62□□□□□ -0.23
HMGN1P05114 AC211476.1-201ENST00000503899 468 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.62□□□□□ -0.23
HMGN1P05114 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 ZNF890P-202ENST00000530367 1156 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 AC092337.1-201ENST00000568699 1129 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
HMGN1P05114 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGN1P05114 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.62□□□□□ -0.23
HMGN1P05114 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HMGN1P05114 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HMGN1P05114 AC073869.1-201ENST00000415574 2762 ntBASIC13.62□□□□□ -0.23
HMGN1P05114 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HMGN1P05114 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGN1P05114 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGN1P05114 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
HMGN1P05114 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGN1P05114 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HMGN1P05114 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HMGN1P05114 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 MBLAC2-202ENST00000514906 1936 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms